BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB035G02LP1|AL430102
(884 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1008 1728 0.0
>3x_Contig1008
Length = 3861
Score = 1728 bits (869), Expect = 0.0
Identities = 880/885 (99%), Gaps = 1/885 (0%)
Strand = Plus / Plus
Query: 1 gatccaaagatacgaataatgaaagaaggtattctatctaaccatatgaactatcagatt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1478 gatccaaagatacgaataatgaaagaaggtattctatctaaccatatgaactatcagatt 1537
Query: 61 gaggatcctgtttttgttaccatgataaacgatgtcgtgaaatttcttccctgtgatttg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1538 gaggatcctgtttttgttaccatgataaacgatgtcgtgaaatttcttccctgtgatttg 1597
Query: 121 gttcaatacgatccccagcttgagaaatggttacaagcatatatcgaatatgatccagaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1598 gttcaatacgatccccagcttgagaaatggttacaagcatatatcgaatatgatccagaa 1657
Query: 181 aaagggttcatgaaacaagatttccaagagatggattattggtgtcatatgacagcyaat 240
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 1658 aaagggttcatgaaacaagatttccaagagatggattattggtgtcatatgacagctaat 1717
Query: 241 cttttgaaattagacaaagattataaagggcatgaactatacataacgactcggctagtg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1718 cttttgaaattagacaaagattataaagggcatgaactatacataacgactcggctagtg 1777
Query: 301 catttgtttgctcaattacaccgtacgataccggagcacaaactatttattattgacaat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1778 catttgtttgctcaattacaccgtacgataccggagcacaaactatttattattgacaat 1837
Query: 361 ccacagagatggtcgccaaacatagctaccataatcaagctaatgatgggatgggaaaat 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1838 ccacagagatggtcgccaaacatagctaccataatcaagctaatgatgggatgggaaaat 1897
Query: 421 tatccaataacacaagcmaatatttcaagtcacttatatcaaccttggactaaggagaat 480
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1898 tatccaataacacaagcaaatatttcaagtcacttatatcaaccttggactaaggagaat 1957
Query: 481 ctccttcatagagacaattcaacttttatcaccgatttccaacaagttaagaaattgtac 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1958 ctccttcatagagacaattcaacttttatcaccgatttccaacaagttaagaaattgtac 2017
Query: 541 acagagattaccgaa-gtacgaaaactttggaatcggaagacttacatgatttcgctaat 599
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2018 acagagattaccgaaggtacgaaaactttggaatcggaagacttacatgatttcgctaat 2077
Query: 600 gagtggatggattatggtgagagtcaagaattattggatggtgatccaagtaattcaatc 659
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2078 gagtggatggattatggtgagagtcaagaattattggatggtgatccaagtaattcaatc 2137
Query: 660 aatatagcaagacaatatttacatgattcgacattggctgtaatccgaggataacgggct 719
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2138 aatatagcaagacaatatttacatgattcgacattggctgtaatccgaggataacgggct 2197
Query: 720 ggcgttatatatatgtgacaggggtaagtaggggattgcaacaattaattgattagtgta 779
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2198 ggcgttatatatatgtgacaggggtaagtaggggattgcaacaattaattgattagtgta 2257
Query: 780 ctttacatcttaagtatgtwaaccactcacattcactcaaataaacgattctgaatttgt 839
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 2258 ctttacatcttaagtatgtaaaccactcacattcactcaaataaacgattctgaatttgt 2317
Query: 840 tgtacacattttattgctgttgttatattggagtgtgtratgtgg 884
|||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 2318 tgtacacattttattgctgttgttatattggagtgtgtaatgtgg 2362
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7101
Number of Sequences: 1807
Number of extensions: 7101
Number of successful extensions: 39
Number of sequences better than 1.0e-20: 1
length of query: 884
length of database: 10,358,551
effective HSP length: 16
effective length of query: 868
effective length of database: 10,329,639
effective search space: 8966126652
effective search space used: 8966126652
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.4 bits)
S2: 50 (99.9 bits)